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#21 Linear mixed models, GWAS, and lme4qtl with Andrey Ziyatdinov
Manage episode 207265587 series 1537951
Inhalt bereitgestellt von Roman Cheplyaka. Alle Podcast-Inhalte, einschließlich Episoden, Grafiken und Podcast-Beschreibungen, werden direkt von Roman Cheplyaka oder seinem Podcast-Plattformpartner hochgeladen und bereitgestellt. Wenn Sie glauben, dass jemand Ihr urheberrechtlich geschütztes Werk ohne Ihre Erlaubnis nutzt, können Sie dem hier beschriebenen Verfahren folgen https://de.player.fm/legal.
Linear mixed models are used to analyze GWAS data and detect QTLs. Andrey Ziyatdinov recently released an R package, lme4qtl, that can be used to formulate and fit these models. In this episode, Andrey and I discuss linear mixed models, genome-wide association studies, and strengths and weaknesses of lme4qtl.
Links:
- Paper: lme4qtl: linear mixed models with flexible covariance structure for genetic studies of related individuals
- lme4qtl on GitHub
If you enjoyed this episode, please consider supporting the podcast on Patreon.
70 Episoden
Teilen
Manage episode 207265587 series 1537951
Inhalt bereitgestellt von Roman Cheplyaka. Alle Podcast-Inhalte, einschließlich Episoden, Grafiken und Podcast-Beschreibungen, werden direkt von Roman Cheplyaka oder seinem Podcast-Plattformpartner hochgeladen und bereitgestellt. Wenn Sie glauben, dass jemand Ihr urheberrechtlich geschütztes Werk ohne Ihre Erlaubnis nutzt, können Sie dem hier beschriebenen Verfahren folgen https://de.player.fm/legal.
Linear mixed models are used to analyze GWAS data and detect QTLs. Andrey Ziyatdinov recently released an R package, lme4qtl, that can be used to formulate and fit these models. In this episode, Andrey and I discuss linear mixed models, genome-wide association studies, and strengths and weaknesses of lme4qtl.
Links:
- Paper: lme4qtl: linear mixed models with flexible covariance structure for genetic studies of related individuals
- lme4qtl on GitHub
If you enjoyed this episode, please consider supporting the podcast on Patreon.
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Ähnelt the bioinformatics chat
How can we, humans, look at our relationship to nature differently? In season three of Going Wild, on top of stories about animals, we invite you to journey through the entire ecological web — from the tiniest of life forms to apex predators — alongside the scientists, activists and adventurers who study it. Wildlife biologist and host Dr. Rae Wynn-Grant has been studying wild animals in their natural habitats all over the world for years. Our award-winning podcast takes you inside the hidde ...
…
continue reading
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…
continue reading
How many organs could you donate and remain alive? How many planet Earths could fit inside the Sun? How high is a giraffe's blood pressure? Why is the sea blue? To find out, Ask The Naked Scientists!
…
continue reading
This Week in Microbiology is a podcast about unseen life on Earth hosted by Vincent Racaniello and friends. Following in the path of his successful shows 'This Week in Virology' (TWiV) and 'This Week in Parasitism' (TWiP), Racaniello and guests produce an informal yet informative conversation about microbes which is accessible to everyone, no matter what their science background.
…
continue reading
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…
continue reading
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…
continue reading
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…
continue reading
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…
continue reading
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…
continue reading
I discuss a variety of topics in both the natural and social sciences, exploring the many fascinating insights that the scientific method yields about the world around us.
…
continue reading
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